I was going to advise getting a knee support/wrap, but I'm no expert, just thinking about what my DH has done in times past with knee pain.
I'd take a look here and see if these seem similar to your knee troubles:
http://forums.zenlabsfitness.com/topic/107-knee-issue/
Funny that today I shifted my weight forward a bit while I ran and it "seemed" to ease the discomfort a bit. I thought it might be my imagination, but considered that my form might be wrong. Thanks for posting, I'll have to look into that.
-LBW
Ashley a mile is a mile no matter what pace you run it. That saying has helped me so much through this journey. I just completed wk5 day3 and I had so much anxiety over it. I was SLOW but I did it and that's all that matters!